dbCAN Logo

Cluster: MurphyR_2019_SRR7411253_bin.6_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_94 113762 114100 - 4.A.3.1.2
TF MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_95 114315 115319 - LacI
TC MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_96 115676 117442 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_97 117509 118948 + GH1
TF MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_98 119225 120262 - LacI
CAZyme MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_99 120604 122046 + GH1
TC MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_100 122223 123983 + 4.A.3.1.1
TF MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_101 124321 125331 - LacI
TC MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_102 125607 127367 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_103 127444 128865 + GH1
pfam MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_104 129233 130465 + Fic
STP MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_105 130503 130841 - DeoRC
TC MurphyR_2019_SRR7411253_bin.6_k141_3307 MurphyR_2019_SRR7411253_bin.6_k141_3307_106 131004 132698 - 4.A.3.1.1
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_94
Type: TC
Location: 113762 - 114100 (-)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_95
Type: TF
Location: 114315 - 115319 (-)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_96
Type: TC
Location: 115676 - 117442 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_97
Type: CAZyme
Location: 117509 - 118948 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_98
Type: TF
Location: 119225 - 120262 (-)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_99
Type: CAZyme
Location: 120604 - 122046 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_100
Type: TC
Location: 122223 - 123983 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_101
Type: TF
Location: 124321 - 125331 (-)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_102
Type: TC
Location: 125607 - 127367 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_103
Type: CAZyme
Location: 127444 - 128865 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_104
Type: pfam
Location: 129233 - 130465 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_105
Type: STP
Location: 130503 - 130841 (-)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_3307_106
Type: TC
Location: 131004 - 132698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7411253_bin.6_k141_3307_98 vegetarian > omnivore 1.00573 0.02677
MurphyR_2019_SRR7411253_bin.6_k141_3307_105 vegetarian > omnivore 1.08252 0.02684

🧭 Explore Read Mapping of CGC

← Back to Cluster List