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Cluster: MurphyR_2019_SRR7411253_bin.6_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_6 6868 7698 - 3.A.1.132.3
pfam MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_7 7958 10837 + UvrA_DNA-bind | UvrA_inter
pfam MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_8 10971 11471 + tRNA_edit
TC MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_9 11475 13778 + 2.A.66.4.4
pfam MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_10 13785 15725 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_11 16091 17704 + 3.A.1.5.27
TC MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_12 17860 18816 + 3.A.1.5.38
TC MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_13 18820 20835 + 3.A.1.5.25
TC MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_14 20836 21663 + 3.A.1.5.27
CAZyme MurphyR_2019_SRR7411253_bin.6_k141_2450 MurphyR_2019_SRR7411253_bin.6_k141_2450_15 21795 22721 + CE7
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_6
Type: TC
Location: 6868 - 7698 (-)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_7
Type: pfam
Location: 7958 - 10837 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_8
Type: pfam
Location: 10971 - 11471 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_9
Type: TC
Location: 11475 - 13778 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_10
Type: pfam
Location: 13785 - 15725 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_11
Type: TC
Location: 16091 - 17704 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_12
Type: TC
Location: 17860 - 18816 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_13
Type: TC
Location: 18820 - 20835 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_14
Type: TC
Location: 20836 - 21663 (+)
Gene ID: MurphyR_2019_SRR7411253_bin.6_k141_2450_15
Type: CAZyme
Location: 21795 - 22721 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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