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Cluster: MurphyR_2019_SRR7352085_bin.1_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_18 20829 21167 - 4.A.3.1.2
TF MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_19 21382 22386 - LacI
TC MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_20 22744 24519 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_21 24586 26025 + GH1
TF MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_22 26302 27339 - LacI
CAZyme MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_23 27681 29123 + GH1
TC MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_24 29300 31060 + 4.A.3.1.1
TF MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_25 31239 32249 - LacI
TC MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_26 32526 34304 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_27 34381 35802 + GH1
pfam MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_28 36168 37400 + Fic
STP MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_29 37355 37903 - DeoRC
TC MurphyR_2019_SRR7352085_bin.1_k141_12638 MurphyR_2019_SRR7352085_bin.1_k141_12638_30 38066 39760 - 4.A.3.1.1
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_18
Type: TC
Location: 20829 - 21167 (-)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_19
Type: TF
Location: 21382 - 22386 (-)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_20
Type: TC
Location: 22744 - 24519 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_21
Type: CAZyme
Location: 24586 - 26025 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_22
Type: TF
Location: 26302 - 27339 (-)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_23
Type: CAZyme
Location: 27681 - 29123 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_24
Type: TC
Location: 29300 - 31060 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_25
Type: TF
Location: 31239 - 32249 (-)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_26
Type: TC
Location: 32526 - 34304 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_27
Type: CAZyme
Location: 34381 - 35802 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_28
Type: pfam
Location: 36168 - 37400 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_29
Type: STP
Location: 37355 - 37903 (-)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_12638_30
Type: TC
Location: 38066 - 39760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7352085_bin.1_k141_12638_22 vegetarian > omnivore 1.02311 0.02677

🧭 Explore Read Mapping of CGC

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