dbCAN Logo

Cluster: MurphyR_2019_SRR7352085_bin.1_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_10 13719 15401 + 2.A.66.4.4
pfam MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_11 15408 17348 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_12 17714 19327 + 3.A.1.5.27
TC MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_13 19485 20441 + 3.A.1.5.38
TC MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_14 20445 22460 + 3.A.1.5.25
TC MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_15 22461 23288 + 3.A.1.5.27
CAZyme MurphyR_2019_SRR7352085_bin.1_k141_29254 MurphyR_2019_SRR7352085_bin.1_k141_29254_16 23420 24346 + CE7
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_10
Type: TC
Location: 13719 - 15401 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_11
Type: pfam
Location: 15408 - 17348 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_12
Type: TC
Location: 17714 - 19327 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_13
Type: TC
Location: 19485 - 20441 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_14
Type: TC
Location: 20445 - 22460 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_15
Type: TC
Location: 22461 - 23288 (+)
Gene ID: MurphyR_2019_SRR7352085_bin.1_k141_29254_16
Type: CAZyme
Location: 23420 - 24346 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List