Cluster: MurphyR_2019_SRR7352066_bin.2_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_43 | 43426 | 44190 | - | 9.B.158.1.2 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_44 | 44221 | 46707 | - | Transglut_core |
| peptidase | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_45 | 46704 | 48128 | - | M17.UPW |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_46 | 48205 | 49038 | - | 3.A.1.1.18 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_47 | 49050 | 49934 | - | 3.A.1.1.41 |
| STP | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_48 | 50005 | 51318 | - | SBP_bac_1 |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_49 | 51434 | 52750 | - | GH29 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_4629 | MurphyR_2019_SRR7352066_bin.2_k141_4629_50 | 52958 | 54682 | + | 8.A.59.2.1 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_43
Type: TC
Location: 43426 - 44190 (-)
Type: TC
Location: 43426 - 44190 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_44
Type: pfam
Location: 44221 - 46707 (-)
Type: pfam
Location: 44221 - 46707 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_45
Type: peptidase
Location: 46704 - 48128 (-)
Type: peptidase
Location: 46704 - 48128 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_46
Type: TC
Location: 48205 - 49038 (-)
Type: TC
Location: 48205 - 49038 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_47
Type: TC
Location: 49050 - 49934 (-)
Type: TC
Location: 49050 - 49934 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_48
Type: STP
Location: 50005 - 51318 (-)
Type: STP
Location: 50005 - 51318 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_49
Type: CAZyme
Location: 51434 - 52750 (-)
Type: CAZyme
Location: 51434 - 52750 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4629_50
Type: TC
Location: 52958 - 54682 (+)
Type: TC
Location: 52958 - 54682 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.