Cluster: MurphyR_2019_SRR7352066_bin.2_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_00046
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_4581 | MurphyR_2019_SRR7352066_bin.2_k141_4581_5 | 3901 | 5454 | + | 4.C.1.1.4 |
| peptidase | MurphyR_2019_SRR7352066_bin.2_k141_4581 | MurphyR_2019_SRR7352066_bin.2_k141_4581_6 | 5898 | 7358 | + | S11.UPW |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_4581 | MurphyR_2019_SRR7352066_bin.2_k141_4581_7 | 7834 | 10989 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_4581 | MurphyR_2019_SRR7352066_bin.2_k141_4581_8 | 10994 | 13468 | + | GT35 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4581_5
Type: TC
Location: 3901 - 5454 (+)
Type: TC
Location: 3901 - 5454 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4581_6
Type: peptidase
Location: 5898 - 7358 (+)
Type: peptidase
Location: 5898 - 7358 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4581_7
Type: pfam
Location: 7834 - 10989 (+)
Type: pfam
Location: 7834 - 10989 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_4581_8
Type: CAZyme
Location: 10994 - 13468 (+)
Type: CAZyme
Location: 10994 - 13468 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.