Cluster: MurphyR_2019_SRR7352066_bin.2_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_00935
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_2835 | MurphyR_2019_SRR7352066_bin.2_k141_2835_2 | 164 | 1258 | + | GH170 |
| TF | MurphyR_2019_SRR7352066_bin.2_k141_2835 | MurphyR_2019_SRR7352066_bin.2_k141_2835_3 | 1310 | 3238 | + | HTH_11 | Mga |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_2835 | MurphyR_2019_SRR7352066_bin.2_k141_2835_4 | 3338 | 3679 | + | 4.A.3.2.5 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_2835 | MurphyR_2019_SRR7352066_bin.2_k141_2835_5 | 3669 | 5000 | + | 4.A.3.2.8 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_2835 | MurphyR_2019_SRR7352066_bin.2_k141_2835_6 | 5047 | 5382 | + | 4.A.3.2.4 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_2835_2
Type: CAZyme
Location: 164 - 1258 (+)
Type: CAZyme
Location: 164 - 1258 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_2835_3
Type: TF
Location: 1310 - 3238 (+)
Type: TF
Location: 1310 - 3238 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_2835_4
Type: TC
Location: 3338 - 3679 (+)
Type: TC
Location: 3338 - 3679 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_2835_5
Type: TC
Location: 3669 - 5000 (+)
Type: TC
Location: 3669 - 5000 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_2835_6
Type: TC
Location: 5047 - 5382 (+)
Type: TC
Location: 5047 - 5382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.