Cluster: MurphyR_2019_SRR7352066_bin.2_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_22 | 25409 | 26539 | - | GH110 |
| sulfatase | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_23 | 26530 | 27087 | - | S1_16 |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_24 | 27134 | 29434 | - | GH95 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_25 | 29436 | 30260 | - | 3.A.1.1.34 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_26 | 30277 | 31158 | - | 3.A.1.1.7 |
| STP | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_27 | 31180 | 32466 | - | SBP_bac_1 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_28 | 32503 | 34164 | - | 3.A.1.1.9 |
| TF | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_29 | 34252 | 35892 | - | HTH_AraC | HTH_AraC |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_1874 | MurphyR_2019_SRR7352066_bin.2_k141_1874_30 | 35939 | 37129 | - | 9.B.33.1.1 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_22
Type: CAZyme
Location: 25409 - 26539 (-)
Type: CAZyme
Location: 25409 - 26539 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_23
Type: sulfatase
Location: 26530 - 27087 (-)
Type: sulfatase
Location: 26530 - 27087 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_24
Type: CAZyme
Location: 27134 - 29434 (-)
Type: CAZyme
Location: 27134 - 29434 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_25
Type: TC
Location: 29436 - 30260 (-)
Type: TC
Location: 29436 - 30260 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_26
Type: TC
Location: 30277 - 31158 (-)
Type: TC
Location: 30277 - 31158 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_27
Type: STP
Location: 31180 - 32466 (-)
Type: STP
Location: 31180 - 32466 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_28
Type: TC
Location: 32503 - 34164 (-)
Type: TC
Location: 32503 - 34164 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_29
Type: TF
Location: 34252 - 35892 (-)
Type: TF
Location: 34252 - 35892 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_1874_30
Type: TC
Location: 35939 - 37129 (-)
Type: TC
Location: 35939 - 37129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.