Cluster: MurphyR_2019_SRR7352066_bin.2_CGC36
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_00903
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_6 | 9259 | 10158 | + | 3.A.1.1.7 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_7 | 10155 | 10985 | + | 3.A.1.1.42 |
| STP | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_8 | 10991 | 11848 | + | PIG-L |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_9 | 11868 | 14231 | + | GH65 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_10 | 14215 | 15081 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_11 | 15094 | 16377 | + | GH16_24 |
| TF | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_12 | 16514 | 18031 | + | HTH_AraC |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_11061 | MurphyR_2019_SRR7352066_bin.2_k141_11061_13 | 18028 | 19746 | + | 9.B.33.1.1 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_6
Type: TC
Location: 9259 - 10158 (+)
Type: TC
Location: 9259 - 10158 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_7
Type: TC
Location: 10155 - 10985 (+)
Type: TC
Location: 10155 - 10985 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_8
Type: STP
Location: 10991 - 11848 (+)
Type: STP
Location: 10991 - 11848 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_9
Type: CAZyme
Location: 11868 - 14231 (+)
Type: CAZyme
Location: 11868 - 14231 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_10
Type:
Location: 14215 - 15081 (+)
Type:
Location: 14215 - 15081 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_11
Type: CAZyme
Location: 15094 - 16377 (+)
Type: CAZyme
Location: 15094 - 16377 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_12
Type: TF
Location: 16514 - 18031 (+)
Type: TF
Location: 16514 - 18031 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_11061_13
Type: TC
Location: 18028 - 19746 (+)
Type: TC
Location: 18028 - 19746 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.