Cluster: MurphyR_2019_SRR7352066_bin.2_CGC33
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_3 | 2774 | 4057 | + | 3.A.1.1.47 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_4 | 4281 | 5594 | + | 3.A.1.1.47 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_5 | 5656 | 6588 | + | 3.A.1.1.47 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_6 | 6622 | 7476 | + | 3.A.1.1.47 |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_7 | 7502 | 8815 | + | GH29 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_8 | 8952 | 10199 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_9 | 10196 | 11014 | + | NAT_N | GNAT_C |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_10 | 11174 | 12544 | - | 2.A.2.3.3 |
| sulfatase | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_11 | 12565 | 14052 | - | S1_43 |
| TF | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_12 | 14233 | 15102 | + | HTH_AraC | HTH_AraC |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_10588 | MurphyR_2019_SRR7352066_bin.2_k141_10588_13 | 15162 | 15725 | - | 2.A.51.1.6 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_3
Type: TC
Location: 2774 - 4057 (+)
Type: TC
Location: 2774 - 4057 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_4
Type: TC
Location: 4281 - 5594 (+)
Type: TC
Location: 4281 - 5594 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_5
Type: TC
Location: 5656 - 6588 (+)
Type: TC
Location: 5656 - 6588 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_6
Type: TC
Location: 6622 - 7476 (+)
Type: TC
Location: 6622 - 7476 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_7
Type: CAZyme
Location: 7502 - 8815 (+)
Type: CAZyme
Location: 7502 - 8815 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_8
Type: pfam
Location: 8952 - 10199 (+)
Type: pfam
Location: 8952 - 10199 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_9
Type: pfam
Location: 10196 - 11014 (+)
Type: pfam
Location: 10196 - 11014 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_10
Type: TC
Location: 11174 - 12544 (-)
Type: TC
Location: 11174 - 12544 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_11
Type: sulfatase
Location: 12565 - 14052 (-)
Type: sulfatase
Location: 12565 - 14052 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_12
Type: TF
Location: 14233 - 15102 (+)
Type: TF
Location: 14233 - 15102 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_10588_13
Type: TC
Location: 15162 - 15725 (-)
Type: TC
Location: 15162 - 15725 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.