Cluster: MurphyR_2019_SRR7352066_bin.2_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_05815
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_39 | 40984 | 41472 | + | GH3 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_40 | 41865 | 42440 | + | Acetyltransf_1 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_41 | 42826 | 44304 | + | 2.A.22.5.3 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_42 | 44322 | 45095 | + | 2.A.79.1.4 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_39
Type: CAZyme
Location: 40984 - 41472 (+)
Type: CAZyme
Location: 40984 - 41472 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_40
Type: pfam
Location: 41865 - 42440 (+)
Type: pfam
Location: 41865 - 42440 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_41
Type: TC
Location: 42826 - 44304 (+)
Type: TC
Location: 42826 - 44304 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_42
Type: TC
Location: 44322 - 45095 (+)
Type: TC
Location: 44322 - 45095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.