Cluster: MurphyR_2019_SRR7352066_bin.2_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_03057
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_9925 | MurphyR_2019_SRR7352066_bin.2_k141_9925_4 | 2799 | 4700 | - | GH2 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9925 | MurphyR_2019_SRR7352066_bin.2_k141_9925_5 | 4758 | 6125 | - | 2.A.2.3.5 |
| TF | MurphyR_2019_SRR7352066_bin.2_k141_9925 | MurphyR_2019_SRR7352066_bin.2_k141_9925_6 | 6342 | 7202 | + | HTH_AraC |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9925 | MurphyR_2019_SRR7352066_bin.2_k141_9925_7 | 7925 | 10675 | - | 3.A.3.2.21 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9925 | MurphyR_2019_SRR7352066_bin.2_k141_9925_8 | 11189 | 13036 | + | 3.A.16.1.2 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9925_4
Type: CAZyme
Location: 2799 - 4700 (-)
Type: CAZyme
Location: 2799 - 4700 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9925_5
Type: TC
Location: 4758 - 6125 (-)
Type: TC
Location: 4758 - 6125 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9925_6
Type: TF
Location: 6342 - 7202 (+)
Type: TF
Location: 6342 - 7202 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9925_7
Type: TC
Location: 7925 - 10675 (-)
Type: TC
Location: 7925 - 10675 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9925_8
Type: TC
Location: 11189 - 13036 (+)
Type: TC
Location: 11189 - 13036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.