Cluster: MurphyR_2019_SRR7352066_bin.2_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_9714 | MurphyR_2019_SRR7352066_bin.2_k141_9714_2 | 1614 | 3050 | - | GH29 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9714 | MurphyR_2019_SRR7352066_bin.2_k141_9714_3 | 3119 | 3673 | - | 3.A.1.2.11 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9714 | MurphyR_2019_SRR7352066_bin.2_k141_9714_4 | 3670 | 4047 | - | 3.A.1.2.13 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9714 | MurphyR_2019_SRR7352066_bin.2_k141_9714_5 | 4040 | 5176 | - | 3.A.1.2.19 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_9714 | MurphyR_2019_SRR7352066_bin.2_k141_9714_6 | 5218 | 5619 | - | 3.A.1.2.17 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9714_2
Type: CAZyme
Location: 1614 - 3050 (-)
Type: CAZyme
Location: 1614 - 3050 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9714_3
Type: TC
Location: 3119 - 3673 (-)
Type: TC
Location: 3119 - 3673 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9714_4
Type: TC
Location: 3670 - 4047 (-)
Type: TC
Location: 3670 - 4047 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9714_5
Type: TC
Location: 4040 - 5176 (-)
Type: TC
Location: 4040 - 5176 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_9714_6
Type: TC
Location: 5218 - 5619 (-)
Type: TC
Location: 5218 - 5619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.