Cluster: MurphyR_2019_SRR7352066_bin.2_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_04891
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_7113 | MurphyR_2019_SRR7352066_bin.2_k141_7113_36 | 33500 | 34759 | - | 2.A.40.1.1 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_7113 | MurphyR_2019_SRR7352066_bin.2_k141_7113_37 | 34793 | 35320 | - | Radical_SAM | Fer4_12 |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_7113 | MurphyR_2019_SRR7352066_bin.2_k141_7113_38 | 35549 | 37921 | - | GH95 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_7113 | MurphyR_2019_SRR7352066_bin.2_k141_7113_39 | 38125 | 38946 | - | 3.A.1.1.45 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_7113 | MurphyR_2019_SRR7352066_bin.2_k141_7113_40 | 38948 | 39817 | - | 3.A.1.1.7 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_7113_36
Type: TC
Location: 33500 - 34759 (-)
Type: TC
Location: 33500 - 34759 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_7113_37
Type: pfam
Location: 34793 - 35320 (-)
Type: pfam
Location: 34793 - 35320 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_7113_38
Type: CAZyme
Location: 35549 - 37921 (-)
Type: CAZyme
Location: 35549 - 37921 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_7113_39
Type: TC
Location: 38125 - 38946 (-)
Type: TC
Location: 38125 - 38946 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_7113_40
Type: TC
Location: 38948 - 39817 (-)
Type: TC
Location: 38948 - 39817 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.