Cluster: MurphyR_2019_SRR7352066_bin.2_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_00187
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_22 | 24092 | 26020 | + | CBM48 | GH13_9 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_23 | 26140 | 26763 | - | 3.A.2.3.2 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_24 | 26885 | 28270 | - | 3.A.2.3.2 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_859 | MurphyR_2019_SRR7352066_bin.2_k141_859_25 | 28286 | 30052 | - | 3.A.2.3.2 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_22
Type: CAZyme
Location: 24092 - 26020 (+)
Type: CAZyme
Location: 24092 - 26020 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_23
Type: TC
Location: 26140 - 26763 (-)
Type: TC
Location: 26140 - 26763 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_24
Type: TC
Location: 26885 - 28270 (-)
Type: TC
Location: 26885 - 28270 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_859_25
Type: TC
Location: 28286 - 30052 (-)
Type: TC
Location: 28286 - 30052 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.