Cluster: MurphyR_2019_SRR7352066_bin.2_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_00745
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_6839 | MurphyR_2019_SRR7352066_bin.2_k141_6839_2 | 218 | 1561 | + | 2.A.66.1.33 |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_6839 | MurphyR_2019_SRR7352066_bin.2_k141_6839_3 | 1565 | 2407 | - | CE4 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7352066_bin.2_k141_6839 | MurphyR_2019_SRR7352066_bin.2_k141_6839_4 | 2489 | 2866 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MurphyR_2019_SRR7352066_bin.2_k141_6839 | MurphyR_2019_SRR7352066_bin.2_k141_6839_5 | 3199 | 4947 | - | Fer4 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_6839 | MurphyR_2019_SRR7352066_bin.2_k141_6839_6 | 4941 | 6773 | - | 3.D.1.5.1 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6839_2
Type: TC
Location: 218 - 1561 (+)
Type: TC
Location: 218 - 1561 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6839_3
Type: CAZyme
Location: 1565 - 2407 (-)
Type: CAZyme
Location: 1565 - 2407 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6839_4
Type:
Location: 2489 - 2866 (-)
Type:
Location: 2489 - 2866 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6839_5
Type: STP
Location: 3199 - 4947 (-)
Type: STP
Location: 3199 - 4947 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6839_6
Type: TC
Location: 4941 - 6773 (-)
Type: TC
Location: 4941 - 6773 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.