Cluster: MurphyR_2019_SRR7352066_bin.2_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_04488
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_6196 | MurphyR_2019_SRR7352066_bin.2_k141_6196_25 | 23814 | 25346 | + | GH79 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_6196 | MurphyR_2019_SRR7352066_bin.2_k141_6196_26 | 25416 | 26294 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_6196 | MurphyR_2019_SRR7352066_bin.2_k141_6196_27 | 26332 | 27156 | - | 3.A.1.26.7 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_6196 | MurphyR_2019_SRR7352066_bin.2_k141_6196_28 | 27149 | 27997 | - | 3.A.1.26.7 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_6196 | MurphyR_2019_SRR7352066_bin.2_k141_6196_29 | 27987 | 28865 | - | 3.A.1.26.7 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6196_25
Type: CAZyme
Location: 23814 - 25346 (+)
Type: CAZyme
Location: 23814 - 25346 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6196_26
Type: pfam
Location: 25416 - 26294 (-)
Type: pfam
Location: 25416 - 26294 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6196_27
Type: TC
Location: 26332 - 27156 (-)
Type: TC
Location: 26332 - 27156 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6196_28
Type: TC
Location: 27149 - 27997 (-)
Type: TC
Location: 27149 - 27997 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6196_29
Type: TC
Location: 27987 - 28865 (-)
Type: TC
Location: 27987 - 28865 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.