Cluster: MurphyR_2019_SRR7352066_bin.2_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_6120 | MurphyR_2019_SRR7352066_bin.2_k141_6120_12 | 11583 | 13658 | + | 3.A.16.1.2 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_6120 | MurphyR_2019_SRR7352066_bin.2_k141_6120_13 | 13751 | 15604 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_6120 | MurphyR_2019_SRR7352066_bin.2_k141_6120_14 | 15680 | 16609 | + | Hpr_kinase_N | Hpr_kinase_C |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_6120 | MurphyR_2019_SRR7352066_bin.2_k141_6120_15 | 16711 | 19320 | - | GT51 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6120_12
Type: TC
Location: 11583 - 13658 (+)
Type: TC
Location: 11583 - 13658 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6120_13
Type: pfam
Location: 13751 - 15604 (+)
Type: pfam
Location: 13751 - 15604 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6120_14
Type: pfam
Location: 15680 - 16609 (+)
Type: pfam
Location: 15680 - 16609 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_6120_15
Type: CAZyme
Location: 16711 - 19320 (-)
Type: CAZyme
Location: 16711 - 19320 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.