Cluster: MurphyR_2019_SRR7352066_bin.2_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- CGC Family ID: CGCFAM_00242
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_5054 | MurphyR_2019_SRR7352066_bin.2_k141_5054_15 | 12995 | 13864 | - | 3.A.1.1.18 |
| TC | MurphyR_2019_SRR7352066_bin.2_k141_5054 | MurphyR_2019_SRR7352066_bin.2_k141_5054_16 | 13881 | 14771 | - | 3.A.1.1.41 |
| STP | MurphyR_2019_SRR7352066_bin.2_k141_5054 | MurphyR_2019_SRR7352066_bin.2_k141_5054_17 | 14847 | 16244 | - | SBP_bac_1 |
| TF | MurphyR_2019_SRR7352066_bin.2_k141_5054 | MurphyR_2019_SRR7352066_bin.2_k141_5054_18 | 16483 | 17346 | + | HTH_AraC | HTH_AraC |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_5054 | MurphyR_2019_SRR7352066_bin.2_k141_5054_19 | 17491 | 19659 | - | GH112 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_5054_15
Type: TC
Location: 12995 - 13864 (-)
Type: TC
Location: 12995 - 13864 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_5054_16
Type: TC
Location: 13881 - 14771 (-)
Type: TC
Location: 13881 - 14771 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_5054_17
Type: STP
Location: 14847 - 16244 (-)
Type: STP
Location: 14847 - 16244 (-)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_5054_18
Type: TF
Location: 16483 - 17346 (+)
Type: TF
Location: 16483 - 17346 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_5054_19
Type: CAZyme
Location: 17491 - 19659 (-)
Type: CAZyme
Location: 17491 - 19659 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.