Cluster: MurphyR_2019_SRR7352066_bin.2_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352066_bin.2
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352066_bin.2_k141_459 | MurphyR_2019_SRR7352066_bin.2_k141_459_4 | 1410 | 2348 | + | 3.A.1.128.6 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_459 | MurphyR_2019_SRR7352066_bin.2_k141_459_5 | 2345 | 3583 | + | ABC2_membrane_3 |
| pfam | MurphyR_2019_SRR7352066_bin.2_k141_459 | MurphyR_2019_SRR7352066_bin.2_k141_459_6 | 3857 | 4429 | + | 5-FTHF_cyc-lig |
| CAZyme | MurphyR_2019_SRR7352066_bin.2_k141_459 | MurphyR_2019_SRR7352066_bin.2_k141_459_7 | 4498 | 6729 | - | GH3 |
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_459_4
Type: TC
Location: 1410 - 2348 (+)
Type: TC
Location: 1410 - 2348 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_459_5
Type: pfam
Location: 2345 - 3583 (+)
Type: pfam
Location: 2345 - 3583 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_459_6
Type: pfam
Location: 3857 - 4429 (+)
Type: pfam
Location: 3857 - 4429 (+)
Gene ID: MurphyR_2019_SRR7352066_bin.2_k141_459_7
Type: CAZyme
Location: 4498 - 6729 (-)
Type: CAZyme
Location: 4498 - 6729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp002320245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.