Cluster: MurphyR_2019_SRR7352053_bin.1_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: MurphyR_2019_SRR7352053_bin.1
- CGC Family ID: CGCFAM_06890
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_26 | 29172 | 30164 | - | GT2 |
| CAZyme | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_27 | 30161 | 31276 | - | GT4 |
| CAZyme | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_28 | 31376 | 32539 | + | GT4 |
| TF | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_29 | 32670 | 34499 | + | 0040266 |
| TC | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_30 | 34496 | 35473 | + | 2.A.7.18.1 |
| pfam | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_31 | 35529 | 36461 | + | LicD |
| CAZyme | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_32 | 36462 | 37592 | + | GT4 |
| CAZyme | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_33 | 37622 | 38659 | + | GT2 |
| pfam | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_34 | 38690 | 39535 | - | LicD |
| TC | MurphyR_2019_SRR7352053_bin.1_k141_1398 | MurphyR_2019_SRR7352053_bin.1_k141_1398_35 | 40879 | 42495 | - | 2.A.1.1.26 |
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_26
Type: CAZyme
Location: 29172 - 30164 (-)
Type: CAZyme
Location: 29172 - 30164 (-)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_27
Type: CAZyme
Location: 30161 - 31276 (-)
Type: CAZyme
Location: 30161 - 31276 (-)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_28
Type: CAZyme
Location: 31376 - 32539 (+)
Type: CAZyme
Location: 31376 - 32539 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_29
Type: TF
Location: 32670 - 34499 (+)
Type: TF
Location: 32670 - 34499 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_30
Type: TC
Location: 34496 - 35473 (+)
Type: TC
Location: 34496 - 35473 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_31
Type: pfam
Location: 35529 - 36461 (+)
Type: pfam
Location: 35529 - 36461 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_32
Type: CAZyme
Location: 36462 - 37592 (+)
Type: CAZyme
Location: 36462 - 37592 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_33
Type: CAZyme
Location: 37622 - 38659 (+)
Type: CAZyme
Location: 37622 - 38659 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_34
Type: pfam
Location: 38690 - 39535 (-)
Type: pfam
Location: 38690 - 39535 (-)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1398_35
Type: TC
Location: 40879 - 42495 (-)
Type: TC
Location: 40879 - 42495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp019425105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.