Cluster: MurphyR_2019_SRR7352053_bin.1_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7352053_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_13 | 10429 | 11751 | + | 2.A.120.1.1 |
| pfam | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_14 | 11753 | 12358 | - | DNA_binding_1 |
| pfam | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_15 | 12327 | 12920 | - | Protoglobin |
| TC | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_16 | 13109 | 15010 | + | 2.A.36.3.1 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_17 | 15022 | 15594 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_18 | 15812 | 19234 | + | 3.A.1.122.13 |
| peptidase | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_19 | 19349 | 19933 | + | C56.UNW |
| pfam | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_20 | 19984 | 20895 | + | TatD_DNase |
| CAZyme | MurphyR_2019_SRR7352053_bin.1_k141_1620 | MurphyR_2019_SRR7352053_bin.1_k141_1620_21 | 21119 | 22279 | + | GH23 |
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_13
Type: TC
Location: 10429 - 11751 (+)
Type: TC
Location: 10429 - 11751 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_14
Type: pfam
Location: 11753 - 12358 (-)
Type: pfam
Location: 11753 - 12358 (-)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_15
Type: pfam
Location: 12327 - 12920 (-)
Type: pfam
Location: 12327 - 12920 (-)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_16
Type: TC
Location: 13109 - 15010 (+)
Type: TC
Location: 13109 - 15010 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_17
Type:
Location: 15022 - 15594 (-)
Type:
Location: 15022 - 15594 (-)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_18
Type: TC
Location: 15812 - 19234 (+)
Type: TC
Location: 15812 - 19234 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_19
Type: peptidase
Location: 19349 - 19933 (+)
Type: peptidase
Location: 19349 - 19933 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_20
Type: pfam
Location: 19984 - 20895 (+)
Type: pfam
Location: 19984 - 20895 (+)
Gene ID: MurphyR_2019_SRR7352053_bin.1_k141_1620_21
Type: CAZyme
Location: 21119 - 22279 (+)
Type: CAZyme
Location: 21119 - 22279 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp019425105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.