dbCAN Logo

Cluster: MurphyR_2019_SRR7351979_bin.5_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_10 13720 15402 + 2.A.66.4.4
pfam MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_11 15409 17349 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_12 17715 19328 + 3.A.1.5.27
TC MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_13 19484 20440 + 3.A.1.5.38
TC MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_14 20444 22459 + 3.A.1.5.25
TC MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_15 22460 23287 + 3.A.1.5.27
CAZyme MurphyR_2019_SRR7351979_bin.5_k141_4613 MurphyR_2019_SRR7351979_bin.5_k141_4613_16 23419 24345 + CE7
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_10
Type: TC
Location: 13720 - 15402 (+)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_11
Type: pfam
Location: 15409 - 17349 (+)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_12
Type: TC
Location: 17715 - 19328 (+)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_13
Type: TC
Location: 19484 - 20440 (+)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_14
Type: TC
Location: 20444 - 22459 (+)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_15
Type: TC
Location: 22460 - 23287 (+)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_4613_16
Type: CAZyme
Location: 23419 - 24345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List