dbCAN Logo

Cluster: MurphyR_2019_SRR7351979_bin.5_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_39 35985 37343 - 2.A.33.1.1
pfam MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_40 37611 38534 - DHH | DHHA2
pfam MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_41 38701 39654 - ROK
TC MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_42 39896 40228 - 4.A.3.2.3
TC MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_43 40238 40540 - 4.A.3.2.9
TC MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_44 40701 42044 - 4.A.3.2.2
CAZyme MurphyR_2019_SRR7351979_bin.5_k141_48945 MurphyR_2019_SRR7351979_bin.5_k141_48945_45 42165 43565 - GH1
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_39
Type: TC
Location: 35985 - 37343 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_40
Type: pfam
Location: 37611 - 38534 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_41
Type: pfam
Location: 38701 - 39654 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_42
Type: TC
Location: 39896 - 40228 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_43
Type: TC
Location: 40238 - 40540 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_44
Type: TC
Location: 40701 - 42044 (-)
Gene ID: MurphyR_2019_SRR7351979_bin.5_k141_48945_45
Type: CAZyme
Location: 42165 - 43565 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351979_bin.5_k141_48945_43 vegan > omnivore 1.03134 0.00455

🧭 Explore Read Mapping of CGC

← Back to Cluster List