Cluster: MurphyR_2019_SRR7351967_bin.9_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351967_bin.9
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_1 | 2 | 1027 | - | 3.A.1.129.1 |
| TC | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_2 | 1152 | 2171 | - | 3.D.4.3.2 |
| TC | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_3 | 2162 | 3550 | - | 3.D.4.3.2 |
| TF | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_4 | 3610 | 4062 | - | Rrf2 |
| TC | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_5 | 4234 | 5232 | - | 2.A.20.1.5 |
| pfam | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_6 | 5225 | 5854 | - | PhoU_div |
| pfam | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_7 | 5933 | 6427 | - | MoCF_biosynth |
| CAZyme | MurphyR_2019_SRR7351967_bin.9_k141_7915 | MurphyR_2019_SRR7351967_bin.9_k141_7915_8 | 6436 | 7287 | - | CE4 |
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_1
Type: TC
Location: 2 - 1027 (-)
Type: TC
Location: 2 - 1027 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_2
Type: TC
Location: 1152 - 2171 (-)
Type: TC
Location: 1152 - 2171 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_3
Type: TC
Location: 2162 - 3550 (-)
Type: TC
Location: 2162 - 3550 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_4
Type: TF
Location: 3610 - 4062 (-)
Type: TF
Location: 3610 - 4062 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_5
Type: TC
Location: 4234 - 5232 (-)
Type: TC
Location: 4234 - 5232 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_6
Type: pfam
Location: 5225 - 5854 (-)
Type: pfam
Location: 5225 - 5854 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_7
Type: pfam
Location: 5933 - 6427 (-)
Type: pfam
Location: 5933 - 6427 (-)
Gene ID: MurphyR_2019_SRR7351967_bin.9_k141_7915_8
Type: CAZyme
Location: 6436 - 7287 (-)
Type: CAZyme
Location: 6436 - 7287 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.