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Cluster: MurphyR_2019_SRR7351840_bin.4_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_42 46757 47464 + 1.C.82.1.1
pfam MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_43 47590 48300 - Metallophos | Metallophos_2
pfam MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_44 48297 50213 - Bmp
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_45 50307 51074 - 1.A.23.4.2
pfam MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_46 51203 53110 - Metallophos | 5_nucleotid_C
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_47 53387 54181 - 3.A.1.34.1
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_48 54174 55097 - 3.A.1.34.1
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_49 55302 56282 - 3.A.1.34.1
NULL(UNKNOWN) MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_50 56443 57228 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_51 57478 58881 - tRNA-synt_2 | tRNA_anti-codon
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_52 59061 59624 - 4.A.1.2.6
peptidase MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_53 59871 60770 + S09.UPW
NULL(UNKNOWN) MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_54 60818 61138 + NULL(UNKNOWN)
[View Structural Homologs]
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_55 61260 63620 + 9.A.8.1.6
TC MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_56 63776 64972 + 2.A.1.2.18
CAZyme MurphyR_2019_SRR7351840_bin.4_k141_3124 MurphyR_2019_SRR7351840_bin.4_k141_3124_57 65126 66502 + GH13_20
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_42
Type: TC
Location: 46757 - 47464 (+)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_43
Type: pfam
Location: 47590 - 48300 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_44
Type: pfam
Location: 48297 - 50213 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_45
Type: TC
Location: 50307 - 51074 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_46
Type: pfam
Location: 51203 - 53110 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_47
Type: TC
Location: 53387 - 54181 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_48
Type: TC
Location: 54174 - 55097 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_49
Type: TC
Location: 55302 - 56282 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_50
Type:
Location: 56443 - 57228 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_51
Type: pfam
Location: 57478 - 58881 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_52
Type: TC
Location: 59061 - 59624 (-)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_53
Type: peptidase
Location: 59871 - 60770 (+)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_54
Type:
Location: 60818 - 61138 (+)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_55
Type: TC
Location: 61260 - 63620 (+)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_56
Type: TC
Location: 63776 - 64972 (+)
Gene ID: MurphyR_2019_SRR7351840_bin.4_k141_3124_57
Type: CAZyme
Location: 65126 - 66502 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351840_bin.4_k141_3124_46 vegan > omnivore 1.79605 0.00842
MurphyR_2019_SRR7351840_bin.4_k141_3124_46 vegetarian > omnivore 1.38455 0.02254

🧭 Explore Read Mapping of CGC

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