Cluster: MurphyR_2019_SRR7351834_bin.5_CGC68
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: MurphyR_2019_SRR7351834_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_1 | 1 | 1356 | - | GH127 |
| pfam | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_2 | 1350 | 2027 | - | Asp_Glu_race |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_3 | 2310 | 6392 | + | CBM67 | GH140 | GH78 |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_4 | 6512 | 7546 | + | GH137 |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_5 | 7562 | 10249 | + | GH106 |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_6 | 10252 | 12252 | + | GH42 |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_7 | 12317 | 14341 | + | GH42 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_8 | 14338 | 15696 | + | 2.A.66.1.33 |
| TF | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_9 | 16039 | 16842 | + | HTH_AraC |
| STP | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_10 | 16842 | 17585 | + | dCache_1 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_15883 | MurphyR_2019_SRR7351834_bin.5_k141_15883_11 | 17647 | 18483 | + | 8.A.59.2.1 |
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_1
Type: CAZyme
Location: 1 - 1356 (-)
Type: CAZyme
Location: 1 - 1356 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_2
Type: pfam
Location: 1350 - 2027 (-)
Type: pfam
Location: 1350 - 2027 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_3
Type: CAZyme
Location: 2310 - 6392 (+)
Type: CAZyme
Location: 2310 - 6392 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_4
Type: CAZyme
Location: 6512 - 7546 (+)
Type: CAZyme
Location: 6512 - 7546 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_5
Type: CAZyme
Location: 7562 - 10249 (+)
Type: CAZyme
Location: 7562 - 10249 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_6
Type: CAZyme
Location: 10252 - 12252 (+)
Type: CAZyme
Location: 10252 - 12252 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_7
Type: CAZyme
Location: 12317 - 14341 (+)
Type: CAZyme
Location: 12317 - 14341 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_8
Type: TC
Location: 14338 - 15696 (+)
Type: TC
Location: 14338 - 15696 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_9
Type: TF
Location: 16039 - 16842 (+)
Type: TF
Location: 16039 - 16842 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_10
Type: STP
Location: 16842 - 17585 (+)
Type: STP
Location: 16842 - 17585 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_15883_11
Type: TC
Location: 17647 - 18483 (+)
Type: TC
Location: 17647 - 18483 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus sp018369015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.