Cluster: MurphyR_2019_SRR7351834_bin.5_CGC58
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351834_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_5 | 3368 | 4354 | - | 3.A.1.2.15 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_6 | 4354 | 5853 | - | 3.A.1.2.15 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_7 | 5853 | 6839 | - | 3.A.1.2.3 |
| pfam | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_8 | 6928 | 8145 | - | Peripla_BP_4 |
| TF | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_9 | 8565 | 9587 | + | LacI |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_10 | 9720 | 12146 | - | GH39 |
| NULL(UNKNOWN) | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_11 | 12322 | 13167 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_14078 | MurphyR_2019_SRR7351834_bin.5_k141_14078_12 | 13697 | 14587 | + | 3.A.23.1.1 |
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_5
Type: TC
Location: 3368 - 4354 (-)
Type: TC
Location: 3368 - 4354 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_6
Type: TC
Location: 4354 - 5853 (-)
Type: TC
Location: 4354 - 5853 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_7
Type: TC
Location: 5853 - 6839 (-)
Type: TC
Location: 5853 - 6839 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_8
Type: pfam
Location: 6928 - 8145 (-)
Type: pfam
Location: 6928 - 8145 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_9
Type: TF
Location: 8565 - 9587 (+)
Type: TF
Location: 8565 - 9587 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_10
Type: CAZyme
Location: 9720 - 12146 (-)
Type: CAZyme
Location: 9720 - 12146 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_11
Type:
Location: 12322 - 13167 (-)
Type:
Location: 12322 - 13167 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_14078_12
Type: TC
Location: 13697 - 14587 (+)
Type: TC
Location: 13697 - 14587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus sp018369015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.