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Cluster: MurphyR_2019_SRR7351834_bin.5_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_4 2179 2847 - 9.B.28.1.2
TF MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_5 2918 3988 - LacI
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_6 4349 5299 + 3.A.1.1.10
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_7 5312 6211 + 3.A.1.1.29
STP MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_8 6251 7945 + SBP_bac_1
CAZyme MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_9 7951 9447 + GH32
STP MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_10 9447 10412 + PfkB
STP MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_11 10526 10777 - PTS-HPr
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_12 11196 12155 - 2.A.69.3.2
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_13 12403 13983 + 2.A.66.2.14
pfam MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_14 14104 15243 + VitK2_biosynth | NMT1 | Phosphonate-bd
pfam MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_15 15246 15995 + BPD_transp_1
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_16 15979 16638 + 3.A.1.3.2
NULL(UNKNOWN) MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_17 17049 17153 + NULL(UNKNOWN)
[View Structural Homologs]
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_18 17158 19176 - 3.A.1.134.4
TC MurphyR_2019_SRR7351834_bin.5_k141_12197 MurphyR_2019_SRR7351834_bin.5_k141_12197_19 19169 19966 - 3.A.1.134.4
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_4
Type: TC
Location: 2179 - 2847 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_5
Type: TF
Location: 2918 - 3988 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_6
Type: TC
Location: 4349 - 5299 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_7
Type: TC
Location: 5312 - 6211 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_8
Type: STP
Location: 6251 - 7945 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_9
Type: CAZyme
Location: 7951 - 9447 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_10
Type: STP
Location: 9447 - 10412 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_11
Type: STP
Location: 10526 - 10777 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_12
Type: TC
Location: 11196 - 12155 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_13
Type: TC
Location: 12403 - 13983 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_14
Type: pfam
Location: 14104 - 15243 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_15
Type: pfam
Location: 15246 - 15995 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_16
Type: TC
Location: 15979 - 16638 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_17
Type:
Location: 17049 - 17153 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_18
Type: TC
Location: 17158 - 19176 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_12197_19
Type: TC
Location: 19169 - 19966 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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