Cluster: MurphyR_2019_SRR7351834_bin.5_CGC45
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351834_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_1 | 1 | 381 | - | 2.A.13.1.3 |
| STP | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_2 | 398 | 1408 | - | SIS |
| TF | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_3 | 1664 | 2374 | + | GntR |
| CAZyme | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_4 | 2524 | 4533 | - | GH120 |
| TF | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_5 | 4675 | 5592 | + | HTH_AraC | HTH_AraC |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_6 | 5709 | 6266 | + | 4.F.1.1.7 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_7 | 6343 | 7029 | - | 3.A.1.5.20 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_8 | 7165 | 8133 | - | 3.A.1.5.12 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_9 | 8130 | 8975 | - | 3.A.1.5.2 |
| TC | MurphyR_2019_SRR7351834_bin.5_k141_11571 | MurphyR_2019_SRR7351834_bin.5_k141_11571_10 | 8968 | 9957 | - | 3.A.1.5.20 |
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_1
Type: TC
Location: 1 - 381 (-)
Type: TC
Location: 1 - 381 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_2
Type: STP
Location: 398 - 1408 (-)
Type: STP
Location: 398 - 1408 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_3
Type: TF
Location: 1664 - 2374 (+)
Type: TF
Location: 1664 - 2374 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_4
Type: CAZyme
Location: 2524 - 4533 (-)
Type: CAZyme
Location: 2524 - 4533 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_5
Type: TF
Location: 4675 - 5592 (+)
Type: TF
Location: 4675 - 5592 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_6
Type: TC
Location: 5709 - 6266 (+)
Type: TC
Location: 5709 - 6266 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_7
Type: TC
Location: 6343 - 7029 (-)
Type: TC
Location: 6343 - 7029 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_8
Type: TC
Location: 7165 - 8133 (-)
Type: TC
Location: 7165 - 8133 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_9
Type: TC
Location: 8130 - 8975 (-)
Type: TC
Location: 8130 - 8975 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_11571_10
Type: TC
Location: 8968 - 9957 (-)
Type: TC
Location: 8968 - 9957 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus sp018369015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.