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Cluster: MurphyR_2019_SRR7351834_bin.5_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_7 5016 6368 - 9.A.40.2.2
pfam MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_8 6387 7196 - VCA0040-like
TC MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_9 7255 8904 - 2.A.58.2.2
NULL(UNKNOWN) MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_10 9026 9463 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_11 9513 10019 - QueT
CAZyme MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_12 10191 12575 - GH39
pfam MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_13 12581 13492 - CN_hydrolase
CAZyme MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_14 13819 14676 - CE1
TC MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_15 15067 15870 - 3.A.1.34.1
TC MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_16 15867 16823 - 3.A.1.34.1
pfam MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_17 16870 17937 - ABC_sub_bind
CAZyme MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_18 18652 20988 - GH3
STP MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_19 21001 22611 - SBP_bac_1
CAZyme MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_20 22835 25525 + GH39
TC MurphyR_2019_SRR7351834_bin.5_k141_7315 MurphyR_2019_SRR7351834_bin.5_k141_7315_21 25704 27062 + 2.A.66.1.33
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_7
Type: TC
Location: 5016 - 6368 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_8
Type: pfam
Location: 6387 - 7196 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_9
Type: TC
Location: 7255 - 8904 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_10
Type:
Location: 9026 - 9463 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_11
Type: pfam
Location: 9513 - 10019 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_12
Type: CAZyme
Location: 10191 - 12575 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_13
Type: pfam
Location: 12581 - 13492 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_14
Type: CAZyme
Location: 13819 - 14676 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_15
Type: TC
Location: 15067 - 15870 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_16
Type: TC
Location: 15867 - 16823 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_17
Type: pfam
Location: 16870 - 17937 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_18
Type: CAZyme
Location: 18652 - 20988 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_19
Type: STP
Location: 21001 - 22611 (-)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_20
Type: CAZyme
Location: 22835 - 25525 (+)
Gene ID: MurphyR_2019_SRR7351834_bin.5_k141_7315_21
Type: TC
Location: 25704 - 27062 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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