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Cluster: MurphyR_2019_SRR7351817_bin.1_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351817_bin.1_k141_27658 MurphyR_2019_SRR7351817_bin.1_k141_27658_44 54344 54667 + 4.A.3.1.1
TC MurphyR_2019_SRR7351817_bin.1_k141_27658 MurphyR_2019_SRR7351817_bin.1_k141_27658_45 54672 55979 + 4.A.3.2.9
TC MurphyR_2019_SRR7351817_bin.1_k141_27658 MurphyR_2019_SRR7351817_bin.1_k141_27658_46 56011 56340 + 4.A.3.2.2
pfam MurphyR_2019_SRR7351817_bin.1_k141_27658 MurphyR_2019_SRR7351817_bin.1_k141_27658_47 56343 57521 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
STP MurphyR_2019_SRR7351817_bin.1_k141_27658 MurphyR_2019_SRR7351817_bin.1_k141_27658_48 57524 59458 + Pyr_redox_2
CAZyme MurphyR_2019_SRR7351817_bin.1_k141_27658 MurphyR_2019_SRR7351817_bin.1_k141_27658_49 59474 60901 + GH1
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27658_44
Type: TC
Location: 54344 - 54667 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27658_45
Type: TC
Location: 54672 - 55979 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27658_46
Type: TC
Location: 56011 - 56340 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27658_47
Type: pfam
Location: 56343 - 57521 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27658_48
Type: STP
Location: 57524 - 59458 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27658_49
Type: CAZyme
Location: 59474 - 60901 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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