Cluster: MurphyR_2019_SRR7351817_bin.1_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351817_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7351817_bin.1_k141_27187 | MurphyR_2019_SRR7351817_bin.1_k141_27187_118 | 144985 | 146052 | + | GT28 |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_27187 | MurphyR_2019_SRR7351817_bin.1_k141_27187_119 | 146132 | 147019 | - | PHP |
| TF | MurphyR_2019_SRR7351817_bin.1_k141_27187 | MurphyR_2019_SRR7351817_bin.1_k141_27187_120 | 147148 | 148050 | + | HTH_AraC |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_27187 | MurphyR_2019_SRR7351817_bin.1_k141_27187_121 | 148113 | 149501 | - | 2.A.2.3.3 |
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27187_118
Type: CAZyme
Location: 144985 - 146052 (+)
Type: CAZyme
Location: 144985 - 146052 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27187_119
Type: pfam
Location: 146132 - 147019 (-)
Type: pfam
Location: 146132 - 147019 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27187_120
Type: TF
Location: 147148 - 148050 (+)
Type: TF
Location: 147148 - 148050 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_27187_121
Type: TC
Location: 148113 - 149501 (-)
Type: TC
Location: 148113 - 149501 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.