Cluster: MurphyR_2019_SRR7351817_bin.1_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351817_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_53 | 48950 | 51175 | - | 3.A.11.3.1 |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_54 | 51179 | 52528 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TF | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_55 | 52668 | 53087 | - | FUR |
| CAZyme | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_56 | 53207 | 54058 | - | GH166 |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_57 | 54128 | 55009 | - | PS_Dcarbxylase |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_58 | 55022 | 55633 | - | CDP-OH_P_transf |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_59 | 55644 | 56666 | - | 4.D.2.1.5 |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_60 | 56656 | 57372 | - | PAP2_3 |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_61 | 57493 | 61170 | - | 2.A.6.3.6 |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_62 | 61307 | 61948 | + | Sod_Fe_N | Sod_Fe_C |
| STP | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_63 | 62054 | 63508 | - | CBS | CBS |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_16668 | MurphyR_2019_SRR7351817_bin.1_k141_16668_64 | 63632 | 64000 | - | 4.A.4.1.2 |
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_53
Type: TC
Location: 48950 - 51175 (-)
Type: TC
Location: 48950 - 51175 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_54
Type: pfam
Location: 51179 - 52528 (-)
Type: pfam
Location: 51179 - 52528 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_55
Type: TF
Location: 52668 - 53087 (-)
Type: TF
Location: 52668 - 53087 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_56
Type: CAZyme
Location: 53207 - 54058 (-)
Type: CAZyme
Location: 53207 - 54058 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_57
Type: pfam
Location: 54128 - 55009 (-)
Type: pfam
Location: 54128 - 55009 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_58
Type: pfam
Location: 55022 - 55633 (-)
Type: pfam
Location: 55022 - 55633 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_59
Type: TC
Location: 55644 - 56666 (-)
Type: TC
Location: 55644 - 56666 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_60
Type: pfam
Location: 56656 - 57372 (-)
Type: pfam
Location: 56656 - 57372 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_61
Type: TC
Location: 57493 - 61170 (-)
Type: TC
Location: 57493 - 61170 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_62
Type: pfam
Location: 61307 - 61948 (+)
Type: pfam
Location: 61307 - 61948 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_63
Type: STP
Location: 62054 - 63508 (-)
Type: STP
Location: 62054 - 63508 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_16668_64
Type: TC
Location: 63632 - 64000 (-)
Type: TC
Location: 63632 - 64000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.