Cluster: MurphyR_2019_SRR7351817_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351817_bin.1
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_9 | 5492 | 6307 | + | 3.A.1.24.5 |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_10 | 6347 | 7144 | + | 3.A.1.3.27 |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_11 | 7170 | 7847 | + | 3.A.1.3.15 |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_12 | 7834 | 8556 | + | 3.A.1.3.25 |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_13 | 8878 | 9897 | + | Virulence_RhuM |
| pfam | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_14 | 9966 | 11300 | - | ELFV_dehydrog | ELFV_dehydrog_N |
| CAZyme | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_15 | 11543 | 12274 | + | GT2 |
| TC | MurphyR_2019_SRR7351817_bin.1_k141_12161 | MurphyR_2019_SRR7351817_bin.1_k141_12161_16 | 12258 | 14816 | + | 9.B.144.1.5 |
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_9
Type: TC
Location: 5492 - 6307 (+)
Type: TC
Location: 5492 - 6307 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_10
Type: TC
Location: 6347 - 7144 (+)
Type: TC
Location: 6347 - 7144 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_11
Type: TC
Location: 7170 - 7847 (+)
Type: TC
Location: 7170 - 7847 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_12
Type: TC
Location: 7834 - 8556 (+)
Type: TC
Location: 7834 - 8556 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_13
Type: pfam
Location: 8878 - 9897 (+)
Type: pfam
Location: 8878 - 9897 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_14
Type: pfam
Location: 9966 - 11300 (-)
Type: pfam
Location: 9966 - 11300 (-)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_15
Type: CAZyme
Location: 11543 - 12274 (+)
Type: CAZyme
Location: 11543 - 12274 (+)
Gene ID: MurphyR_2019_SRR7351817_bin.1_k141_12161_16
Type: TC
Location: 12258 - 14816 (+)
Type: TC
Location: 12258 - 14816 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.