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Cluster: MurphyR_2019_SRR7351803_bin.9_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_28 33985 34323 - 4.A.3.1.2
TF MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_29 34538 35542 - LacI
TC MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_30 35900 37666 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_31 37733 39172 + GH1
TF MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_32 39508 40518 - LacI
TC MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_33 40794 42572 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_34 42649 44070 + GH1
pfam MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_35 44438 45670 + Fic
STP MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_36 45708 46049 - DeoRC
TC MurphyR_2019_SRR7351803_bin.9_k141_29090 MurphyR_2019_SRR7351803_bin.9_k141_29090_37 46212 47906 - 4.A.3.1.1
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_28
Type: TC
Location: 33985 - 34323 (-)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_29
Type: TF
Location: 34538 - 35542 (-)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_30
Type: TC
Location: 35900 - 37666 (+)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_31
Type: CAZyme
Location: 37733 - 39172 (+)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_32
Type: TF
Location: 39508 - 40518 (-)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_33
Type: TC
Location: 40794 - 42572 (+)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_34
Type: CAZyme
Location: 42649 - 44070 (+)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_35
Type: pfam
Location: 44438 - 45670 (+)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_36
Type: STP
Location: 45708 - 46049 (-)
Gene ID: MurphyR_2019_SRR7351803_bin.9_k141_29090_37
Type: TC
Location: 46212 - 47906 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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