Cluster: MurphyR_2019_SRR7351767_bin.5_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351767_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351767_bin.5_k141_6549 | MurphyR_2019_SRR7351767_bin.5_k141_6549_15 | 18021 | 20237 | + | 9.B.97.5.1 |
| TC | MurphyR_2019_SRR7351767_bin.5_k141_6549 | MurphyR_2019_SRR7351767_bin.5_k141_6549_16 | 20785 | 22047 | - | 2.A.55.3.6 |
| STP | MurphyR_2019_SRR7351767_bin.5_k141_6549 | MurphyR_2019_SRR7351767_bin.5_k141_6549_17 | 22056 | 23900 | - | CBS | CBS |
| CAZyme | MurphyR_2019_SRR7351767_bin.5_k141_6549 | MurphyR_2019_SRR7351767_bin.5_k141_6549_18 | 24229 | 25635 | - | CE4 |
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6549_15
Type: TC
Location: 18021 - 20237 (+)
Type: TC
Location: 18021 - 20237 (+)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6549_16
Type: TC
Location: 20785 - 22047 (-)
Type: TC
Location: 20785 - 22047 (-)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6549_17
Type: STP
Location: 22056 - 23900 (-)
Type: STP
Location: 22056 - 23900 (-)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6549_18
Type: CAZyme
Location: 24229 - 25635 (-)
Type: CAZyme
Location: 24229 - 25635 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.