Cluster: MurphyR_2019_SRR7351767_bin.5_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MurphyR_2019_SRR7351767_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7351767_bin.5_k141_6053 | MurphyR_2019_SRR7351767_bin.5_k141_6053_5 | 5982 | 8573 | - | GH106 |
| TF | MurphyR_2019_SRR7351767_bin.5_k141_6053 | MurphyR_2019_SRR7351767_bin.5_k141_6053_6 | 8688 | 9680 | + | 0035607 |
| CAZyme | MurphyR_2019_SRR7351767_bin.5_k141_6053 | MurphyR_2019_SRR7351767_bin.5_k141_6053_7 | 9851 | 11290 | + | GH1 |
| TC | MurphyR_2019_SRR7351767_bin.5_k141_6053 | MurphyR_2019_SRR7351767_bin.5_k141_6053_8 | 11431 | 11967 | + | 4.A.1.2.6 |
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6053_5
Type: CAZyme
Location: 5982 - 8573 (-)
Type: CAZyme
Location: 5982 - 8573 (-)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6053_6
Type: TF
Location: 8688 - 9680 (+)
Type: TF
Location: 8688 - 9680 (+)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6053_7
Type: CAZyme
Location: 9851 - 11290 (+)
Type: CAZyme
Location: 9851 - 11290 (+)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_6053_8
Type: TC
Location: 11431 - 11967 (+)
Type: TC
Location: 11431 - 11967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.