Cluster: MurphyR_2019_SRR7351767_bin.5_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: MurphyR_2019_SRR7351767_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MurphyR_2019_SRR7351767_bin.5_k141_2931 | MurphyR_2019_SRR7351767_bin.5_k141_2931_1 | 2 | 1966 | - | CE19 | CE8 |
| CAZyme | MurphyR_2019_SRR7351767_bin.5_k141_2931 | MurphyR_2019_SRR7351767_bin.5_k141_2931_2 | 2098 | 3693 | - | GH28 |
| TC | MurphyR_2019_SRR7351767_bin.5_k141_2931 | MurphyR_2019_SRR7351767_bin.5_k141_2931_3 | 3808 | 5367 | - | 2.A.2.5.1 |
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_2931_1
Type: CAZyme
Location: 2 - 1966 (-)
Type: CAZyme
Location: 2 - 1966 (-)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_2931_2
Type: CAZyme
Location: 2098 - 3693 (-)
Type: CAZyme
Location: 2098 - 3693 (-)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_2931_3
Type: TC
Location: 3808 - 5367 (-)
Type: TC
Location: 3808 - 5367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.