Cluster: MurphyR_2019_SRR7351767_bin.5_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MurphyR_2019_SRR7351767_bin.5
- Continent: Oceania
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MurphyR_2019_SRR7351767_bin.5_k141_10411 | MurphyR_2019_SRR7351767_bin.5_k141_10411_2 | 609 | 1565 | + | 3.A.1.5.38 |
| TC | MurphyR_2019_SRR7351767_bin.5_k141_10411 | MurphyR_2019_SRR7351767_bin.5_k141_10411_3 | 1569 | 3584 | + | 3.A.1.5.25 |
| TC | MurphyR_2019_SRR7351767_bin.5_k141_10411 | MurphyR_2019_SRR7351767_bin.5_k141_10411_4 | 3585 | 4412 | + | 3.A.1.5.27 |
| CAZyme | MurphyR_2019_SRR7351767_bin.5_k141_10411 | MurphyR_2019_SRR7351767_bin.5_k141_10411_5 | 4544 | 5470 | + | CE7 |
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_10411_2
Type: TC
Location: 609 - 1565 (+)
Type: TC
Location: 609 - 1565 (+)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_10411_3
Type: TC
Location: 1569 - 3584 (+)
Type: TC
Location: 1569 - 3584 (+)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_10411_4
Type: TC
Location: 3585 - 4412 (+)
Type: TC
Location: 3585 - 4412 (+)
Gene ID: MurphyR_2019_SRR7351767_bin.5_k141_10411_5
Type: CAZyme
Location: 4544 - 5470 (+)
Type: CAZyme
Location: 4544 - 5470 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AA
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.