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Cluster: MurphyR_2019_SRR7351762_bin.14_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_24 30103 30897 - 3.A.1.34.1
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_25 30890 31813 - 3.A.1.34.1
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_26 32017 32997 - 3.A.1.34.1
NULL(UNKNOWN) MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_27 33158 33943 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_28 34202 35605 - tRNA-synt_2 | tRNA_anti-codon
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_29 35787 36350 - 4.A.1.2.6
peptidase MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_30 36594 37493 + S09.UPW
NULL(UNKNOWN) MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_31 37622 37963 + NULL(UNKNOWN)
[View Structural Homologs]
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_32 38034 40394 + 9.A.8.1.6
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_33 40708 42372 + 4.A.1.1.3
TF MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_34 42435 43187 - HTH_6
CAZyme MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_35 43362 44735 + GH4
NULL(UNKNOWN) MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_36 44901 45653 + NULL(UNKNOWN)
[View Structural Homologs]
TC MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_37 45829 47025 + 2.A.1.2.18
CAZyme MurphyR_2019_SRR7351762_bin.14_k141_7543 MurphyR_2019_SRR7351762_bin.14_k141_7543_38 47179 48555 + GH13_20
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_24
Type: TC
Location: 30103 - 30897 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_25
Type: TC
Location: 30890 - 31813 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_26
Type: TC
Location: 32017 - 32997 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_27
Type:
Location: 33158 - 33943 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_28
Type: pfam
Location: 34202 - 35605 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_29
Type: TC
Location: 35787 - 36350 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_30
Type: peptidase
Location: 36594 - 37493 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_31
Type:
Location: 37622 - 37963 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_32
Type: TC
Location: 38034 - 40394 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_33
Type: TC
Location: 40708 - 42372 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_34
Type: TF
Location: 42435 - 43187 (-)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_35
Type: CAZyme
Location: 43362 - 44735 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_36
Type:
Location: 44901 - 45653 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_37
Type: TC
Location: 45829 - 47025 (+)
Gene ID: MurphyR_2019_SRR7351762_bin.14_k141_7543_38
Type: CAZyme
Location: 47179 - 48555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351762_bin.14_k141_7543_33 vegan > omnivore 1.11552 0.01280
MurphyR_2019_SRR7351762_bin.14_k141_7543_35 vegan > omnivore 1.74864 0.01280
MurphyR_2019_SRR7351762_bin.14_k141_7543_36 vegan > omnivore 1.97053 0.01280

🧭 Explore Read Mapping of CGC

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