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Cluster: MurphyR_2019_SRR7351738_bin.5_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_36 39962 40498 - 4.A.1.2.6
TF MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_37 40836 41690 + HTH_6
STP MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_38 41935 42615 - Pribosyltran
TC MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_39 43052 45820 + 3.A.3.4.1
pfam MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_40 46192 47469 + AAA_14 | DUF4143
pfam MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_41 47567 47788 - Glyco_hydro_1
CAZyme MurphyR_2019_SRR7351738_bin.5_k141_12747 MurphyR_2019_SRR7351738_bin.5_k141_12747_42 47801 48997 - GH1
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_36
Type: TC
Location: 39962 - 40498 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_37
Type: TF
Location: 40836 - 41690 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_38
Type: STP
Location: 41935 - 42615 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_39
Type: TC
Location: 43052 - 45820 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_40
Type: pfam
Location: 46192 - 47469 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_41
Type: pfam
Location: 47567 - 47788 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_12747_42
Type: CAZyme
Location: 47801 - 48997 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351738_bin.5_k141_12747_40 vegetarian > vegan 1.40257 0.00313

🧭 Explore Read Mapping of CGC

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