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Cluster: MurphyR_2019_SRR7351738_bin.5_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_134 160548 160886 - 4.A.3.1.2
TF MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_135 161101 162105 - LacI
TC MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_136 162463 164238 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_137 164305 165744 + GH1
TF MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_138 166012 167049 - LacI
CAZyme MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_139 167391 168833 + GH1
TC MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_140 169010 170770 + 4.A.3.1.1
TF MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_141 171183 172193 - LacI
TC MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_142 172469 174247 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_143 174323 175744 + GH1
pfam MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_144 176113 177345 + Fic
STP MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_145 177383 177721 - DeoRC
TC MurphyR_2019_SRR7351738_bin.5_k141_31093 MurphyR_2019_SRR7351738_bin.5_k141_31093_146 177884 179578 - 4.A.3.1.1
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_134
Type: TC
Location: 160548 - 160886 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_135
Type: TF
Location: 161101 - 162105 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_136
Type: TC
Location: 162463 - 164238 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_137
Type: CAZyme
Location: 164305 - 165744 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_138
Type: TF
Location: 166012 - 167049 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_139
Type: CAZyme
Location: 167391 - 168833 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_140
Type: TC
Location: 169010 - 170770 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_141
Type: TF
Location: 171183 - 172193 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_142
Type: TC
Location: 172469 - 174247 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_143
Type: CAZyme
Location: 174323 - 175744 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_144
Type: pfam
Location: 176113 - 177345 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_145
Type: STP
Location: 177383 - 177721 (-)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_31093_146
Type: TC
Location: 177884 - 179578 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351738_bin.5_k141_31093_138 vegetarian > omnivore 1.01041 0.02242

🧭 Explore Read Mapping of CGC

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