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Cluster: MurphyR_2019_SRR7351738_bin.5_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351738_bin.5_k141_18849 MurphyR_2019_SRR7351738_bin.5_k141_18849_19 19966 21429 + 2.A.3.2.3
NULL(UNKNOWN) MurphyR_2019_SRR7351738_bin.5_k141_18849 MurphyR_2019_SRR7351738_bin.5_k141_18849_20 21893 22213 + NULL(UNKNOWN)
[View Structural Homologs]
TC MurphyR_2019_SRR7351738_bin.5_k141_18849 MurphyR_2019_SRR7351738_bin.5_k141_18849_21 22335 24695 + 9.A.8.1.6
TC MurphyR_2019_SRR7351738_bin.5_k141_18849 MurphyR_2019_SRR7351738_bin.5_k141_18849_22 24816 26012 + 2.A.1.2.18
CAZyme MurphyR_2019_SRR7351738_bin.5_k141_18849 MurphyR_2019_SRR7351738_bin.5_k141_18849_23 26167 27543 + GH13_20
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_18849_19
Type: TC
Location: 19966 - 21429 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_18849_20
Type:
Location: 21893 - 22213 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_18849_21
Type: TC
Location: 22335 - 24695 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_18849_22
Type: TC
Location: 24816 - 26012 (+)
Gene ID: MurphyR_2019_SRR7351738_bin.5_k141_18849_23
Type: CAZyme
Location: 26167 - 27543 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351738_bin.5_k141_18849_19 vegan > omnivore 1.53374 0.00701

🧭 Explore Read Mapping of CGC

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