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Cluster: MurphyR_2019_SRR7351726_bin.5_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_42 47381 47719 - 4.A.3.1.2
TF MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_43 47934 48938 - LacI
TC MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_44 49295 51070 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_45 51137 52576 + GH1
TF MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_46 52847 53884 - LacI
CAZyme MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_47 54226 55668 + GH1
TC MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_48 55845 57605 + 4.A.3.1.1
TF MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_49 57939 58949 - LacI
TC MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_50 59225 61003 + 4.A.3.1.1
CAZyme MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_51 61079 62500 + GH1
pfam MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_52 62869 64101 + Fic
STP MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_53 64207 64602 - DeoRC
TC MurphyR_2019_SRR7351726_bin.5_k141_45266 MurphyR_2019_SRR7351726_bin.5_k141_45266_54 64765 66459 - 4.A.3.1.1
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_42
Type: TC
Location: 47381 - 47719 (-)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_43
Type: TF
Location: 47934 - 48938 (-)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_44
Type: TC
Location: 49295 - 51070 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_45
Type: CAZyme
Location: 51137 - 52576 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_46
Type: TF
Location: 52847 - 53884 (-)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_47
Type: CAZyme
Location: 54226 - 55668 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_48
Type: TC
Location: 55845 - 57605 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_49
Type: TF
Location: 57939 - 58949 (-)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_50
Type: TC
Location: 59225 - 61003 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_51
Type: CAZyme
Location: 61079 - 62500 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_52
Type: pfam
Location: 62869 - 64101 (+)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_53
Type: STP
Location: 64207 - 64602 (-)
Gene ID: MurphyR_2019_SRR7351726_bin.5_k141_45266_54
Type: TC
Location: 64765 - 66459 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MurphyR_2019_SRR7351726_bin.5_k141_45266_46 vegetarian > omnivore 1.02293 0.00863

🧭 Explore Read Mapping of CGC

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