Cluster: MGYG000004902_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004902
- CGC Family ID: CGCFAM_11054
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004902_17 | MGYG000004902_17_2 | 1776 | 3293 | + | 4.C.1.1.4 |
| NULL(UNKNOWN) | MGYG000004902_17 | MGYG000004902_17_3 | 3358 | 3795 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | MGYG000004902_17 | MGYG000004902_17_4 | 3802 | 5235 | - | S1_37 |
| CAZyme | MGYG000004902_17 | MGYG000004902_17_5 | 5298 | 7208 | + | GH13_9 |
| CAZyme | MGYG000004902_17 | MGYG000004902_17_6 | 7342 | 8871 | + | GH77 |
| pfam | MGYG000004902_17 | MGYG000004902_17_7 | 8868 | 10784 | + | Sulfatase |
| CAZyme | MGYG000004902_17 | MGYG000004902_17_8 | 10868 | 12175 | + | GT2 |
Gene ID: MGYG000004902_17_2
Type: TC
Location: 1776 - 3293 (+)
Type: TC
Location: 1776 - 3293 (+)
Gene ID: MGYG000004902_17_3
Type:
Location: 3358 - 3795 (-)
Type:
Location: 3358 - 3795 (-)
Gene ID: MGYG000004902_17_4
Type: sulfatase
Location: 3802 - 5235 (-)
Type: sulfatase
Location: 3802 - 5235 (-)
Gene ID: MGYG000004902_17_5
Type: CAZyme
Location: 5298 - 7208 (+)
Type: CAZyme
Location: 5298 - 7208 (+)
Gene ID: MGYG000004902_17_6
Type: CAZyme
Location: 7342 - 8871 (+)
Type: CAZyme
Location: 7342 - 8871 (+)
Gene ID: MGYG000004902_17_7
Type: pfam
Location: 8868 - 10784 (+)
Type: pfam
Location: 8868 - 10784 (+)
Gene ID: MGYG000004902_17_8
Type: CAZyme
Location: 10868 - 12175 (+)
Type: CAZyme
Location: 10868 - 12175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Synergistaceae
Genus
Caccocola
Species
Caccocola sp900545755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.