Cluster: MGYG000004902_CGC1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004902
- CGC Family ID: CGCFAM_01123
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004902_1 | MGYG000004902_1_72 | 75477 | 76430 | - | GT9 |
| CAZyme | MGYG000004902_1 | MGYG000004902_1_73 | 76488 | 77567 | - | GT4 |
| CAZyme | MGYG000004902_1 | MGYG000004902_1_74 | 77564 | 78601 | - | GT4 |
| CAZyme | MGYG000004902_1 | MGYG000004902_1_75 | 78614 | 79621 | - | GT2 |
| CAZyme | MGYG000004902_1 | MGYG000004902_1_76 | 79643 | 80659 | - | GT8 |
| pfam | MGYG000004902_1 | MGYG000004902_1_77 | 80685 | 81947 | - | Wzy_C |
| TC | MGYG000004902_1 | MGYG000004902_1_78 | 82074 | 83243 | - | 3.A.15.2.1 |
| TC | MGYG000004902_1 | MGYG000004902_1_79 | 83246 | 84742 | - | 3.A.15.4.1 |
| TC | MGYG000004902_1 | MGYG000004902_1_80 | 84744 | 86783 | - | 3.A.15.4.1 |
Gene ID: MGYG000004902_1_72
Type: CAZyme
Location: 75477 - 76430 (-)
Type: CAZyme
Location: 75477 - 76430 (-)
Gene ID: MGYG000004902_1_73
Type: CAZyme
Location: 76488 - 77567 (-)
Type: CAZyme
Location: 76488 - 77567 (-)
Gene ID: MGYG000004902_1_74
Type: CAZyme
Location: 77564 - 78601 (-)
Type: CAZyme
Location: 77564 - 78601 (-)
Gene ID: MGYG000004902_1_75
Type: CAZyme
Location: 78614 - 79621 (-)
Type: CAZyme
Location: 78614 - 79621 (-)
Gene ID: MGYG000004902_1_76
Type: CAZyme
Location: 79643 - 80659 (-)
Type: CAZyme
Location: 79643 - 80659 (-)
Gene ID: MGYG000004902_1_77
Type: pfam
Location: 80685 - 81947 (-)
Type: pfam
Location: 80685 - 81947 (-)
Gene ID: MGYG000004902_1_78
Type: TC
Location: 82074 - 83243 (-)
Type: TC
Location: 82074 - 83243 (-)
Gene ID: MGYG000004902_1_79
Type: TC
Location: 83246 - 84742 (-)
Type: TC
Location: 83246 - 84742 (-)
Gene ID: MGYG000004902_1_80
Type: TC
Location: 84744 - 86783 (-)
Type: TC
Location: 84744 - 86783 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Synergistaceae
Genus
Caccocola
Species
Caccocola sp900545755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.