Cluster: MGYG000004900_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004900
- CGC Family ID: CGCFAM_00553
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004900_40 | MGYG000004900_40_6 | 2366 | 3886 | - | 1.I.1.1.3 |
| CAZyme | MGYG000004900_40 | MGYG000004900_40_7 | 3994 | 5382 | - | GT28 |
| pfam | MGYG000004900_40 | MGYG000004900_40_8 | 5595 | 6926 | + | TRAM | tRNA_U5-meth_tr |
| pfam | MGYG000004900_40 | MGYG000004900_40_9 | 7141 | 7530 | - | GtrA_DPMS_TM |
| CAZyme | MGYG000004900_40 | MGYG000004900_40_10 | 7770 | 8735 | + | GT2 |
| TC | MGYG000004900_40 | MGYG000004900_40_11 | 9271 | 9804 | + | 3.D.1.8.1 |
Gene ID: MGYG000004900_40_6
Type: TC
Location: 2366 - 3886 (-)
Type: TC
Location: 2366 - 3886 (-)
Gene ID: MGYG000004900_40_7
Type: CAZyme
Location: 3994 - 5382 (-)
Type: CAZyme
Location: 3994 - 5382 (-)
Gene ID: MGYG000004900_40_8
Type: pfam
Location: 5595 - 6926 (+)
Type: pfam
Location: 5595 - 6926 (+)
Gene ID: MGYG000004900_40_9
Type: pfam
Location: 7141 - 7530 (-)
Type: pfam
Location: 7141 - 7530 (-)
Gene ID: MGYG000004900_40_10
Type: CAZyme
Location: 7770 - 8735 (+)
Type: CAZyme
Location: 7770 - 8735 (+)
Gene ID: MGYG000004900_40_11
Type: TC
Location: 9271 - 9804 (+)
Type: TC
Location: 9271 - 9804 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Aphodovivens
Species
Aphodovivens sp900550385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004900_40_9 | vegetarian > omnivore | 1.40734 | 0.03027 |