dbCAN Logo

Cluster: MGYG000004900_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004900_15 MGYG000004900_15_15 18420 19733 - GH3
pfam MGYG000004900_15 MGYG000004900_15_16 19736 20518 - Radical_SAM | Fer4_12
pfam MGYG000004900_15 MGYG000004900_15_17 20949 23366 + ATP-cone | NRDD
TC MGYG000004900_15 MGYG000004900_15_18 23385 24308 + 2.A.7.3.39
STP MGYG000004900_15 MGYG000004900_15_19 24464 24937 + GyrI-like
TC MGYG000004900_15 MGYG000004900_15_20 25437 26243 + 3.A.1.7.5
pfam MGYG000004900_15 MGYG000004900_15_21 26248 26910 + PhoU | PhoU
STP MGYG000004900_15 MGYG000004900_15_22 27132 28082 + SBP_bac_1
TC MGYG000004900_15 MGYG000004900_15_23 28158 29099 + 3.A.1.7.5
TC MGYG000004900_15 MGYG000004900_15_24 29092 30006 + 3.A.1.7.5
Gene ID: MGYG000004900_15_15
Type: CAZyme
Location: 18420 - 19733 (-)
Gene ID: MGYG000004900_15_16
Type: pfam
Location: 19736 - 20518 (-)
Gene ID: MGYG000004900_15_17
Type: pfam
Location: 20949 - 23366 (+)
Gene ID: MGYG000004900_15_18
Type: TC
Location: 23385 - 24308 (+)
Gene ID: MGYG000004900_15_19
Type: STP
Location: 24464 - 24937 (+)
Gene ID: MGYG000004900_15_20
Type: TC
Location: 25437 - 26243 (+)
Gene ID: MGYG000004900_15_21
Type: pfam
Location: 26248 - 26910 (+)
Gene ID: MGYG000004900_15_22
Type: STP
Location: 27132 - 28082 (+)
Gene ID: MGYG000004900_15_23
Type: TC
Location: 28158 - 29099 (+)
Gene ID: MGYG000004900_15_24
Type: TC
Location: 29092 - 30006 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List