Cluster: MGYG000004899_CGC9
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_00337
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004899_1 | MGYG000004899_1_281 | 373252 | 375852 | - | GH13_10 |
| NULL(UNKNOWN) | MGYG000004899_1 | MGYG000004899_1_282 | 376035 | 377480 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004899_1 | MGYG000004899_1_283 | 377573 | 378709 | - | SusE | SusF_SusE |
| TC | MGYG000004899_1 | MGYG000004899_1_284 | 378743 | 380344 | - | 8.A.46.1.1 |
| TC | MGYG000004899_1 | MGYG000004899_1_285 | 380364 | 383441 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004899_1 | MGYG000004899_1_286 | 383992 | 386466 | - | GH2 |
| CAZyme | MGYG000004899_1 | MGYG000004899_1_287 | 386498 | 387679 | - | GH53 |
| pfam | MGYG000004899_1 | MGYG000004899_1_288 | 387748 | 388920 | - | SusE |
| TC | MGYG000004899_1 | MGYG000004899_1_289 | 388937 | 390550 | - | 8.A.46.1.1 |
| TC | MGYG000004899_1 | MGYG000004899_1_290 | 390571 | 393639 | - | 1.B.14.6.1 |
| TF | MGYG000004899_1 | MGYG000004899_1_291 | 393835 | 397779 | - | HTH_AraC |
| TF | MGYG000004899_1 | MGYG000004899_1_292 | 398018 | 399022 | + | LacI |
| TC | MGYG000004899_1 | MGYG000004899_1_293 | 399046 | 400263 | + | 2.A.2.6.2 |
| NULL(UNKNOWN) | MGYG000004899_1 | MGYG000004899_1_294 | 400209 | 400421 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004899_1 | MGYG000004899_1_295 | 400551 | 402170 | + | DUF6377 |
| TC | MGYG000004899_1 | MGYG000004899_1_296 | 402452 | 405391 | + | 1.B.14.6.1 |
Gene ID: MGYG000004899_1_281
Type: CAZyme
Location: 373252 - 375852 (-)
Type: CAZyme
Location: 373252 - 375852 (-)
Gene ID: MGYG000004899_1_282
Type:
Location: 376035 - 377480 (-)
Type:
Location: 376035 - 377480 (-)
Gene ID: MGYG000004899_1_283
Type: pfam
Location: 377573 - 378709 (-)
Type: pfam
Location: 377573 - 378709 (-)
Gene ID: MGYG000004899_1_284
Type: TC
Location: 378743 - 380344 (-)
Type: TC
Location: 378743 - 380344 (-)
Gene ID: MGYG000004899_1_285
Type: TC
Location: 380364 - 383441 (-)
Type: TC
Location: 380364 - 383441 (-)
Gene ID: MGYG000004899_1_286
Type: CAZyme
Location: 383992 - 386466 (-)
Type: CAZyme
Location: 383992 - 386466 (-)
Gene ID: MGYG000004899_1_287
Type: CAZyme
Location: 386498 - 387679 (-)
Type: CAZyme
Location: 386498 - 387679 (-)
Gene ID: MGYG000004899_1_288
Type: pfam
Location: 387748 - 388920 (-)
Type: pfam
Location: 387748 - 388920 (-)
Gene ID: MGYG000004899_1_289
Type: TC
Location: 388937 - 390550 (-)
Type: TC
Location: 388937 - 390550 (-)
Gene ID: MGYG000004899_1_290
Type: TC
Location: 390571 - 393639 (-)
Type: TC
Location: 390571 - 393639 (-)
Gene ID: MGYG000004899_1_291
Type: TF
Location: 393835 - 397779 (-)
Type: TF
Location: 393835 - 397779 (-)
Gene ID: MGYG000004899_1_292
Type: TF
Location: 398018 - 399022 (+)
Type: TF
Location: 398018 - 399022 (+)
Gene ID: MGYG000004899_1_293
Type: TC
Location: 399046 - 400263 (+)
Type: TC
Location: 399046 - 400263 (+)
Gene ID: MGYG000004899_1_294
Type:
Location: 400209 - 400421 (+)
Type:
Location: 400209 - 400421 (+)
Gene ID: MGYG000004899_1_295
Type: pfam
Location: 400551 - 402170 (+)
Type: pfam
Location: 400551 - 402170 (+)
Gene ID: MGYG000004899_1_296
Type: TC
Location: 402452 - 405391 (+)
Type: TC
Location: 402452 - 405391 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004899_1_289 | vegan > omnivore | 1.26818 | 0.02328 |